Lyme Disease: A Deeper Dive
- Redwood Naturopathic Medicine
- Jun 10
- 3 min read
Lyme: More Than a Bullseye Rash
When people think of Lyme disease, the classic “bullseye” rash—known as erythema migrans—often comes to mind. However, many individuals with Lyme never develop this telltale sign. Lyme disease is caused by the bacterium Borrelia burgdorferi, primarily transmitted through the bite of a black-legged tick. In its early stages, it can mimic the flu, presenting with fever, fatigue, and joint pain.
The real danger lies in missed diagnoses. When left untreated, Lyme can progress into a complex, systemic illness, impacting multiple body systems.
Late-stage Lyme can affect:
Joints (Lyme arthritis)
Nervous system (numbness, memory loss, “brain fog”)
Heart (Lyme carditis)
Eyes and skin
Co-Infections: The Hidden Puzzle Pieces

Ticks rarely carry just one pathogen. In a single bite, they can transmit multiple organisms—called co-infections—that can intensify symptoms and complicate recovery. Identifying and treating these co-infections is crucial, as they often don’t respond to standard Lyme treatment alone.
Common co-infections include:
Babesia – A malaria-like parasite causing chills, night sweats, and air hunger
Bartonella – Known for neurological symptoms like anxiety, irritability, and neuropathy
Ehrlichia/Anaplasma – Can cause fever, muscle pain, and low white blood cell counts
Mycoplasma – Often linked to fatigue and joint pain
Why it matters: These co-infections may require different treatment protocols, such as antimalarials, antivirals, or targeted antibacterial therapies.
Chronic Lyme vs. Post-Treatment Lyme Disease Syndrome (PTLDS)
For some, symptoms persist long after completing antibiotic therapy. This lingering illness is sometimes called “Chronic Lyme,” though it may also be diagnosed as Post-Treatment Lyme Disease Syndrome (PTLDS). While controversial, leading theories suggest causes such as:
Persistent infection
Autoimmune dysfunction
Residual tissue or nerve damage
Unresolved co-infections
Common ongoing symptoms:
Debilitating fatigue
Migrating pain
Sleep disturbances
Cognitive dysfunction (“Lyme brain”)
Takeaway: It’s not all in your head. The medical community is becoming more aware of long-term Lyme symptoms, but approaches still vary widely. If you're struggling, keep advocating for yourself—many patients go years without an accurate diagnosis.
Testing Options for Chronic Lyme Disease & Co-Infections
"I’ve been sick for months (or years), but my tests are negative. Could it still be Lyme?"This is a common and deeply frustrating experience for many. Unfortunately, Lyme disease and its co-infections are notoriously difficult to detect, especially in later stages.
Why Lyme testing is so challenging:
Borrelia burgdorferi can hide in tissues, joints, and the nervous system—not just in the bloodstream
The immune system may no longer mount a strong response, especially in chronic cases
Many conventional tests look for antibodies, which may be absent in late-stage or immunocompromised individuals
Co-infections like Babesia and Bartonella require entirely different tests
There are specialty labs with more sensitive, broad-spectrum testing, but they’re often costly and not covered by insurance.
Interpreting Results: Key Tips
A negative test doesn’t always mean you’re not infected
Retesting may be necessary if symptoms persist or change
Work with a Lyme-literate medical provider who understands the nuances of tick-borne illness
Keep a detailed symptom journal—your personal history matters just as much as lab results
Immune System & Inflammation: The Long Game
Lyme disease can severely disrupt immune function. In some cases, patients may experience:
Cytokine storms (excessive inflammatory response)
Mast Cell Activation Syndrome (MCAS) – unpredictable allergic-type reactions
Autoimmune-like symptoms
Managing inflammation becomes a cornerstone of recovery. This is where integrative and lifestyle-based therapies shine.
Nutrition & Detox: Fueling Your Recovery
Lyme places enormous metabolic and inflammatory stress on the body. Supporting detoxification and reducing systemic inflammation can make a significant difference in how you feel.
Anti-inflammatory diet suggestions:
Load up on leafy greens, berries, fatty fish, and turmeric
Avoid processed foods, refined sugar, and gluten

Support detoxification:
Stay hydrated—add electrolytes when needed
Use binders under practitioner supervision
Consider gentle therapies like sauna, Epsom salt baths, ionic foot baths, dry brushing, and intermittent fasting
Tools & Resources
Find a Lyme-literate doctor – An experienced provider is key to proper diagnosis and treatment
Patient communities – Support and information: Lymedisease.org, Global Lyme Alliance, Facebook groups
Tick removal and prevention – Refer to the CDC Tick Guide
Watch: Under Our Skin – A powerful documentary shedding light on the patient experience
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